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615 lines
19 KiB
615 lines
19 KiB
// Copyright 2004 The Trustees of Indiana University. |
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// Use, modification and distribution is subject to the Boost Software |
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// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at |
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// http://www.boost.org/LICENSE_1_0.txt) |
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// Authors: Douglas Gregor |
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// Peter Gottschling |
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// Andrew Lumsdaine |
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#ifndef BOOST_PARALLEL_DISTRIBUTION_HPP |
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#define BOOST_PARALLEL_DISTRIBUTION_HPP |
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#ifndef BOOST_GRAPH_USE_MPI |
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#error "Parallel BGL files should not be included unless <boost/graph/use_mpi.hpp> has been included" |
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#endif |
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#include <cstddef> |
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#include <vector> |
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#include <algorithm> |
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#include <numeric> |
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#include <boost/assert.hpp> |
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#include <boost/iterator/counting_iterator.hpp> |
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#include <boost/random/uniform_int.hpp> |
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#include <boost/shared_ptr.hpp> |
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#include <typeinfo> |
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namespace boost { namespace parallel { |
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template<typename ProcessGroup, typename SizeType = std::size_t> |
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class variant_distribution |
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{ |
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public: |
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typedef typename ProcessGroup::process_id_type process_id_type; |
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typedef typename ProcessGroup::process_size_type process_size_type; |
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typedef SizeType size_type; |
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private: |
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struct basic_distribution |
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{ |
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virtual ~basic_distribution() {} |
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virtual size_type block_size(process_id_type, size_type) const = 0; |
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virtual process_id_type in_process(size_type) const = 0; |
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virtual size_type local(size_type) const = 0; |
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virtual size_type global(size_type) const = 0; |
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virtual size_type global(process_id_type, size_type) const = 0; |
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virtual void* address() = 0; |
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virtual const void* address() const = 0; |
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virtual const std::type_info& type() const = 0; |
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}; |
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template<typename Distribution> |
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struct poly_distribution : public basic_distribution |
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{ |
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explicit poly_distribution(const Distribution& distribution) |
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: distribution_(distribution) { } |
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virtual size_type block_size(process_id_type id, size_type n) const |
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{ return distribution_.block_size(id, n); } |
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virtual process_id_type in_process(size_type i) const |
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{ return distribution_(i); } |
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virtual size_type local(size_type i) const |
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{ return distribution_.local(i); } |
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virtual size_type global(size_type n) const |
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{ return distribution_.global(n); } |
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virtual size_type global(process_id_type id, size_type n) const |
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{ return distribution_.global(id, n); } |
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virtual void* address() { return &distribution_; } |
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virtual const void* address() const { return &distribution_; } |
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virtual const std::type_info& type() const { return typeid(Distribution); } |
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private: |
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Distribution distribution_; |
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}; |
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public: |
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variant_distribution() { } |
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template<typename Distribution> |
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variant_distribution(const Distribution& distribution) |
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: distribution_(new poly_distribution<Distribution>(distribution)) { } |
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size_type block_size(process_id_type id, size_type n) const |
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{ return distribution_->block_size(id, n); } |
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process_id_type operator()(size_type i) const |
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{ return distribution_->in_process(i); } |
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size_type local(size_type i) const |
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{ return distribution_->local(i); } |
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size_type global(size_type n) const |
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{ return distribution_->global(n); } |
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size_type global(process_id_type id, size_type n) const |
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{ return distribution_->global(id, n); } |
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operator bool() const { return distribution_; } |
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void clear() { distribution_.reset(); } |
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template<typename T> |
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T* as() |
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{ |
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if (distribution_->type() == typeid(T)) |
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return static_cast<T*>(distribution_->address()); |
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else |
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return 0; |
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} |
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template<typename T> |
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const T* as() const |
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{ |
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if (distribution_->type() == typeid(T)) |
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return static_cast<T*>(distribution_->address()); |
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else |
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return 0; |
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} |
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private: |
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shared_ptr<basic_distribution> distribution_; |
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}; |
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struct block |
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{ |
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template<typename LinearProcessGroup> |
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explicit block(const LinearProcessGroup& pg, std::size_t n) |
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: id(process_id(pg)), p(num_processes(pg)), n(n) { } |
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// If there are n elements in the distributed data structure, returns the number of elements stored locally. |
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template<typename SizeType> |
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SizeType block_size(SizeType n) const |
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{ return (n / p) + ((std::size_t)(n % p) > id? 1 : 0); } |
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// If there are n elements in the distributed data structure, returns the number of elements stored on processor ID |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType n) const |
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{ return (n / p) + ((ProcessID)(n % p) > id? 1 : 0); } |
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// Returns the processor on which element with global index i is stored |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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SizeType cutoff_processor = n % p; |
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SizeType cutoff = cutoff_processor * (n / p + 1); |
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if (i < cutoff) return i / (n / p + 1); |
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else return cutoff_processor + (i - cutoff) / (n / p); |
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} |
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// Find the starting index for processor with the given id |
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template<typename ID> |
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std::size_t start(ID id) const |
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{ |
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std::size_t estimate = id * (n / p + 1); |
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ID cutoff_processor = n % p; |
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if (id < cutoff_processor) return estimate; |
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else return estimate - (id - cutoff_processor); |
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} |
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// Find the local index for the ith global element |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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SizeType owner = (*this)(i); |
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return i - start(owner); |
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} |
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// Returns the global index of local element i |
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template<typename SizeType> |
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SizeType global(SizeType i) const |
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{ return global(id, i); } |
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// Returns the global index of the ith local element on processor id |
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template<typename ProcessID, typename SizeType> |
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SizeType global(ProcessID id, SizeType i) const |
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{ return i + start(id); } |
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private: |
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std::size_t id; //< The ID number of this processor |
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std::size_t p; //< The number of processors |
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std::size_t n; //< The size of the problem space |
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}; |
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// Block distribution with arbitrary block sizes |
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struct uneven_block |
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{ |
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typedef std::vector<std::size_t> size_vector; |
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template<typename LinearProcessGroup> |
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explicit uneven_block(const LinearProcessGroup& pg, const std::vector<std::size_t>& local_sizes) |
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: id(process_id(pg)), p(num_processes(pg)), local_sizes(local_sizes) |
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{ |
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BOOST_ASSERT(local_sizes.size() == p); |
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local_starts.resize(p + 1); |
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local_starts[0] = 0; |
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std::partial_sum(local_sizes.begin(), local_sizes.end(), &local_starts[1]); |
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n = local_starts[p]; |
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} |
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// To do maybe: enter local size in each process and gather in constructor (much handier) |
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// template<typename LinearProcessGroup> |
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// explicit uneven_block(const LinearProcessGroup& pg, std::size_t my_local_size) |
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// If there are n elements in the distributed data structure, returns the number of elements stored locally. |
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template<typename SizeType> |
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SizeType block_size(SizeType) const |
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{ return local_sizes[id]; } |
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// If there are n elements in the distributed data structure, returns the number of elements stored on processor ID |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType) const |
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{ return local_sizes[id]; } |
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// Returns the processor on which element with global index i is stored |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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BOOST_ASSERT (i >= (SizeType) 0 && i < (SizeType) n); // check for valid range |
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size_vector::const_iterator lb = std::lower_bound(local_starts.begin(), local_starts.end(), (std::size_t) i); |
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return ((SizeType)(*lb) == i ? lb : --lb) - local_starts.begin(); |
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} |
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// Find the starting index for processor with the given id |
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template<typename ID> |
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std::size_t start(ID id) const |
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{ |
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return local_starts[id]; |
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} |
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// Find the local index for the ith global element |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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SizeType owner = (*this)(i); |
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return i - start(owner); |
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} |
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// Returns the global index of local element i |
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template<typename SizeType> |
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SizeType global(SizeType i) const |
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{ return global(id, i); } |
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// Returns the global index of the ith local element on processor id |
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template<typename ProcessID, typename SizeType> |
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SizeType global(ProcessID id, SizeType i) const |
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{ return i + start(id); } |
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private: |
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std::size_t id; //< The ID number of this processor |
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std::size_t p; //< The number of processors |
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std::size_t n; //< The size of the problem space |
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std::vector<std::size_t> local_sizes; //< The sizes of all blocks |
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std::vector<std::size_t> local_starts; //< Lowest global index of each block |
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}; |
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struct oned_block_cyclic |
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{ |
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template<typename LinearProcessGroup> |
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explicit oned_block_cyclic(const LinearProcessGroup& pg, std::size_t size) |
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: id(process_id(pg)), p(num_processes(pg)), size(size) { } |
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template<typename SizeType> |
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SizeType block_size(SizeType n) const |
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{ |
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return block_size(id, n); |
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} |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType n) const |
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{ |
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SizeType all_blocks = n / size; |
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SizeType extra_elements = n % size; |
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SizeType everyone_gets = all_blocks / p; |
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SizeType extra_blocks = all_blocks % p; |
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SizeType my_blocks = everyone_gets + (p < extra_blocks? 1 : 0); |
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SizeType my_elements = my_blocks * size |
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+ (p == extra_blocks? extra_elements : 0); |
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return my_elements; |
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} |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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return (i / size) % p; |
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} |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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return ((i / size) / p) * size + i % size; |
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} |
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template<typename SizeType> |
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SizeType global(SizeType i) const |
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{ return global(id, i); } |
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template<typename ProcessID, typename SizeType> |
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SizeType global(ProcessID id, SizeType i) const |
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{ |
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return ((i / size) * p + id) * size + i % size; |
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} |
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private: |
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std::size_t id; //< The ID number of this processor |
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std::size_t p; //< The number of processors |
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std::size_t size; //< Block size |
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}; |
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struct twod_block_cyclic |
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{ |
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template<typename LinearProcessGroup> |
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explicit twod_block_cyclic(const LinearProcessGroup& pg, |
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std::size_t block_rows, std::size_t block_columns, |
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std::size_t data_columns_per_row) |
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: id(process_id(pg)), p(num_processes(pg)), |
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block_rows(block_rows), block_columns(block_columns), |
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data_columns_per_row(data_columns_per_row) |
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{ } |
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template<typename SizeType> |
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SizeType block_size(SizeType n) const |
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{ |
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return block_size(id, n); |
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} |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType n) const |
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{ |
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// TBD: This is really lame :) |
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int result = -1; |
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while (n > 0) { |
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--n; |
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if ((*this)(n) == id && (int)local(n) > result) result = local(n); |
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} |
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++result; |
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// std::cerr << "Block size of id " << id << " is " << result << std::endl; |
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return result; |
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} |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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SizeType result = get_block_num(i) % p; |
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// std::cerr << "Item " << i << " goes on processor " << result << std::endl; |
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return result; |
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} |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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// Compute the start of the block |
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std::size_t block_num = get_block_num(i); |
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// std::cerr << "Item " << i << " is in block #" << block_num << std::endl; |
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std::size_t local_block_num = block_num / p; |
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std::size_t block_start = local_block_num * block_rows * block_columns; |
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// Compute the offset into the block |
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std::size_t data_row = i / data_columns_per_row; |
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std::size_t data_col = i % data_columns_per_row; |
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std::size_t block_offset = (data_row % block_rows) * block_columns |
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+ (data_col % block_columns); |
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// std::cerr << "Item " << i << " maps to local index " << block_start+block_offset << std::endl; |
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return block_start + block_offset; |
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} |
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template<typename SizeType> |
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SizeType global(SizeType i) const |
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{ |
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// Compute the (global) block in which this element resides |
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SizeType local_block_num = i / (block_rows * block_columns); |
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SizeType block_offset = i % (block_rows * block_columns); |
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SizeType block_num = local_block_num * p + id; |
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// Compute the position of the start of the block (globally) |
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SizeType block_start = block_num * block_rows * block_columns; |
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std::cerr << "Block " << block_num << " starts at index " << block_start |
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<< std::endl; |
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// Compute the row and column of this block |
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SizeType block_row = block_num / (data_columns_per_row / block_columns); |
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SizeType block_col = block_num % (data_columns_per_row / block_columns); |
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SizeType row_in_block = block_offset / block_columns; |
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SizeType col_in_block = block_offset % block_columns; |
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std::cerr << "Local index " << i << " is in block at row " << block_row |
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<< ", column " << block_col << ", in-block row " << row_in_block |
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<< ", in-block col " << col_in_block << std::endl; |
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SizeType result = block_row * block_rows + block_col * block_columns |
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+ row_in_block * block_rows + col_in_block; |
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std::cerr << "global(" << i << "@" << id << ") = " << result |
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<< " =? " << local(result) << std::endl; |
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BOOST_ASSERT(i == local(result)); |
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return result; |
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} |
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private: |
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template<typename SizeType> |
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std::size_t get_block_num(SizeType i) const |
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{ |
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std::size_t data_row = i / data_columns_per_row; |
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std::size_t data_col = i % data_columns_per_row; |
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std::size_t block_row = data_row / block_rows; |
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std::size_t block_col = data_col / block_columns; |
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std::size_t blocks_in_row = data_columns_per_row / block_columns; |
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std::size_t block_num = block_col * blocks_in_row + block_row; |
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return block_num; |
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} |
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std::size_t id; //< The ID number of this processor |
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std::size_t p; //< The number of processors |
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std::size_t block_rows; //< The # of rows in each block |
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std::size_t block_columns; //< The # of columns in each block |
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std::size_t data_columns_per_row; //< The # of columns per row of data |
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}; |
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class twod_random |
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{ |
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template<typename RandomNumberGen> |
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struct random_int |
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{ |
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explicit random_int(RandomNumberGen& gen) : gen(gen) { } |
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template<typename T> |
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T operator()(T n) const |
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{ |
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uniform_int<T> distrib(0, n-1); |
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return distrib(gen); |
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} |
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private: |
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RandomNumberGen& gen; |
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}; |
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public: |
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template<typename LinearProcessGroup, typename RandomNumberGen> |
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explicit twod_random(const LinearProcessGroup& pg, |
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std::size_t block_rows, std::size_t block_columns, |
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std::size_t data_columns_per_row, |
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std::size_t n, |
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RandomNumberGen& gen) |
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: id(process_id(pg)), p(num_processes(pg)), |
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block_rows(block_rows), block_columns(block_columns), |
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data_columns_per_row(data_columns_per_row), |
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global_to_local(n / (block_rows * block_columns)) |
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{ |
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std::copy(make_counting_iterator(std::size_t(0)), |
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make_counting_iterator(global_to_local.size()), |
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global_to_local.begin()); |
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random_int<RandomNumberGen> rand(gen); |
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std::random_shuffle(global_to_local.begin(), global_to_local.end(), rand); |
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} |
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template<typename SizeType> |
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SizeType block_size(SizeType n) const |
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{ |
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return block_size(id, n); |
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} |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType n) const |
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{ |
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// TBD: This is really lame :) |
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int result = -1; |
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while (n > 0) { |
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--n; |
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if ((*this)(n) == id && (int)local(n) > result) result = local(n); |
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} |
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++result; |
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// std::cerr << "Block size of id " << id << " is " << result << std::endl; |
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return result; |
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} |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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SizeType result = get_block_num(i) % p; |
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// std::cerr << "Item " << i << " goes on processor " << result << std::endl; |
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return result; |
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} |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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// Compute the start of the block |
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std::size_t block_num = get_block_num(i); |
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// std::cerr << "Item " << i << " is in block #" << block_num << std::endl; |
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std::size_t local_block_num = block_num / p; |
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std::size_t block_start = local_block_num * block_rows * block_columns; |
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// Compute the offset into the block |
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std::size_t data_row = i / data_columns_per_row; |
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std::size_t data_col = i % data_columns_per_row; |
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std::size_t block_offset = (data_row % block_rows) * block_columns |
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+ (data_col % block_columns); |
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// std::cerr << "Item " << i << " maps to local index " << block_start+block_offset << std::endl; |
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return block_start + block_offset; |
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} |
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private: |
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template<typename SizeType> |
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std::size_t get_block_num(SizeType i) const |
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{ |
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std::size_t data_row = i / data_columns_per_row; |
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std::size_t data_col = i % data_columns_per_row; |
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std::size_t block_row = data_row / block_rows; |
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std::size_t block_col = data_col / block_columns; |
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std::size_t blocks_in_row = data_columns_per_row / block_columns; |
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std::size_t block_num = block_col * blocks_in_row + block_row; |
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return global_to_local[block_num]; |
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} |
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std::size_t id; //< The ID number of this processor |
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std::size_t p; //< The number of processors |
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std::size_t block_rows; //< The # of rows in each block |
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std::size_t block_columns; //< The # of columns in each block |
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std::size_t data_columns_per_row; //< The # of columns per row of data |
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std::vector<std::size_t> global_to_local; |
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}; |
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class random_distribution |
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{ |
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template<typename RandomNumberGen> |
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struct random_int |
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{ |
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explicit random_int(RandomNumberGen& gen) : gen(gen) { } |
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template<typename T> |
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T operator()(T n) const |
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{ |
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uniform_int<T> distrib(0, n-1); |
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return distrib(gen); |
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} |
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private: |
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RandomNumberGen& gen; |
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}; |
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public: |
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template<typename LinearProcessGroup, typename RandomNumberGen> |
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random_distribution(const LinearProcessGroup& pg, RandomNumberGen& gen, |
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std::size_t n) |
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: base(pg, n), local_to_global(n), global_to_local(n) |
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{ |
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std::copy(make_counting_iterator(std::size_t(0)), |
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make_counting_iterator(n), |
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local_to_global.begin()); |
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random_int<RandomNumberGen> rand(gen); |
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std::random_shuffle(local_to_global.begin(), local_to_global.end(), rand); |
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for (std::vector<std::size_t>::size_type i = 0; i < n; ++i) |
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global_to_local[local_to_global[i]] = i; |
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} |
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template<typename SizeType> |
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SizeType block_size(SizeType n) const |
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{ return base.block_size(n); } |
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template<typename SizeType, typename ProcessID> |
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SizeType block_size(ProcessID id, SizeType n) const |
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{ return base.block_size(id, n); } |
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template<typename SizeType> |
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SizeType operator()(SizeType i) const |
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{ |
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return base(global_to_local[i]); |
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} |
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template<typename SizeType> |
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SizeType local(SizeType i) const |
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{ |
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return base.local(global_to_local[i]); |
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} |
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template<typename ProcessID, typename SizeType> |
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SizeType global(ProcessID p, SizeType i) const |
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{ |
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return local_to_global[base.global(p, i)]; |
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} |
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template<typename SizeType> |
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SizeType global(SizeType i) const |
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{ |
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return local_to_global[base.global(i)]; |
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} |
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private: |
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block base; |
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std::vector<std::size_t> local_to_global; |
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std::vector<std::size_t> global_to_local; |
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}; |
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|
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} } // end namespace boost::parallel |
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#endif // BOOST_PARALLEL_DISTRIBUTION_HPP |
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