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319 lines
11 KiB
319 lines
11 KiB
// Copyright (C) 2007 Douglas Gregor |
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// Use, modification and distribution is subject to the Boost Software |
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// License, Version 1.0. (See accompanying file LICENSE_1_0.txt or copy at |
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// http://www.boost.org/LICENSE_1_0.txt) |
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// This file contains code for the distributed adjacency list's |
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// initializations. It should not be included directly by users. |
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#ifndef BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP |
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#define BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP |
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#ifndef BOOST_GRAPH_USE_MPI |
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#error "Parallel BGL files should not be included unless <boost/graph/use_mpi.hpp> has been included" |
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#endif |
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namespace boost { |
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template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS> |
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template<typename EdgeIterator> |
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void |
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PBGL_DISTRIB_ADJLIST_TYPE:: |
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initialize(EdgeIterator first, EdgeIterator last, |
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vertices_size_type, const base_distribution_type& distribution, |
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vecS) |
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{ |
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process_id_type id = process_id(process_group_); |
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while (first != last) { |
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if ((process_id_type)distribution(first->first) == id) { |
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vertex_descriptor source(id, distribution.local(first->first)); |
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vertex_descriptor target(distribution(first->second), |
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distribution.local(first->second)); |
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add_edge(source, target, *this); |
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} |
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++first; |
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} |
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synchronize(process_group_); |
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} |
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template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS> |
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template<typename EdgeIterator, typename EdgePropertyIterator> |
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void |
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PBGL_DISTRIB_ADJLIST_TYPE:: |
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initialize(EdgeIterator first, EdgeIterator last, |
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EdgePropertyIterator ep_iter, |
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vertices_size_type, const base_distribution_type& distribution, |
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vecS) |
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{ |
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process_id_type id = process_id(process_group_); |
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while (first != last) { |
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if (static_cast<process_id_type>(distribution(first->first)) == id) { |
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vertex_descriptor source(id, distribution.local(first->first)); |
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vertex_descriptor target(distribution(first->second), |
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distribution.local(first->second)); |
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add_edge(source, target, *ep_iter, *this); |
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} |
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++first; |
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++ep_iter; |
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} |
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synchronize(process_group_); |
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} |
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template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS> |
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template<typename EdgeIterator, typename EdgePropertyIterator, |
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typename VertexListS> |
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void |
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PBGL_DISTRIB_ADJLIST_TYPE:: |
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initialize(EdgeIterator first, EdgeIterator last, |
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EdgePropertyIterator ep_iter, |
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vertices_size_type n, const base_distribution_type& distribution, |
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VertexListS) |
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{ |
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using boost::parallel::inplace_all_to_all; |
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typedef vertices_size_type vertex_number_t; |
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typedef typename std::iterator_traits<EdgePropertyIterator>::value_type |
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edge_property_init_t; |
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typedef std::pair<vertex_descriptor, vertex_number_t> |
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st_pair; |
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typedef std::pair<st_pair, edge_property_init_t> delayed_edge_t; |
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process_group_type pg = process_group(); |
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process_id_type id = process_id(pg); |
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// Vertex indices |
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std::vector<local_vertex_descriptor> index_to_vertex; |
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index_to_vertex.reserve(num_vertices(*this)); |
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BGL_FORALL_VERTICES_T(v, base(), inherited) |
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index_to_vertex.push_back(v); |
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// The list of edges we can't add immediately. |
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std::vector<delayed_edge_t> delayed_edges; |
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std::vector<std::vector<vertex_number_t> > descriptor_requests; |
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descriptor_requests.resize(num_processes(pg)); |
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// Add all of the edges we can, up to the point where we run |
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// into a descriptor we don't know. |
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while (first != last) { |
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if (distribution(first->first) == id) { |
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if (distribution(first->second) != id) break; |
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vertex_descriptor source |
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(id, index_to_vertex[distribution.local(first->first)]); |
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vertex_descriptor target |
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(distribution(first->second), |
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index_to_vertex[distribution.local(first->second)]); |
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add_edge(source, target, *ep_iter, *this); |
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} |
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++first; |
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++ep_iter; |
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} |
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// Queue all of the remaining edges and determine the set of |
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// descriptors we need to know about. |
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while (first != last) { |
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if (distribution(first->first) == id) { |
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vertex_descriptor source |
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(id, index_to_vertex[distribution.local(first->first)]); |
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process_id_type dest = distribution(first->second); |
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if (dest != id) { |
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descriptor_requests[dest] |
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.push_back(distribution.local(first->second)); |
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// Compact request list if we need to |
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if (descriptor_requests[dest].size() > |
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distribution.block_size(dest, n)) { |
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std::sort(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()); |
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descriptor_requests[dest].erase( |
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std::unique(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()), |
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descriptor_requests[dest].end()); |
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} |
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} |
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// Save the edge for later |
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delayed_edges.push_back |
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(delayed_edge_t(st_pair(source, first->second), *ep_iter)); |
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} |
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++first; |
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++ep_iter; |
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} |
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// Compact descriptor requests |
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for (process_id_type dest = 0; dest < num_processes(pg); ++dest) { |
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std::sort(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()); |
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descriptor_requests[dest].erase( |
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std::unique(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()), |
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descriptor_requests[dest].end()); |
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} |
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// Send out all of the descriptor requests |
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std::vector<std::vector<vertex_number_t> > in_descriptor_requests; |
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in_descriptor_requests.resize(num_processes(pg)); |
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inplace_all_to_all(pg, descriptor_requests, in_descriptor_requests); |
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// Reply to all of the descriptor requests |
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std::vector<std::vector<local_vertex_descriptor> > |
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descriptor_responses; |
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descriptor_responses.resize(num_processes(pg)); |
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for (process_id_type dest = 0; dest < num_processes(pg); ++dest) { |
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for (std::size_t i = 0; i < in_descriptor_requests[dest].size(); ++i) { |
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local_vertex_descriptor v = |
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index_to_vertex[in_descriptor_requests[dest][i]]; |
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descriptor_responses[dest].push_back(v); |
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} |
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in_descriptor_requests[dest].clear(); |
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} |
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in_descriptor_requests.clear(); |
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inplace_all_to_all(pg, descriptor_responses); |
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// Add the queued edges |
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for(typename std::vector<delayed_edge_t>::iterator i |
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= delayed_edges.begin(); i != delayed_edges.end(); ++i) { |
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process_id_type dest = distribution(i->first.second); |
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local_vertex_descriptor tgt_local; |
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if (dest == id) { |
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tgt_local = index_to_vertex[distribution.local(i->first.second)]; |
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} else { |
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std::vector<vertex_number_t>& requests = descriptor_requests[dest]; |
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typename std::vector<vertex_number_t>::iterator pos = |
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std::lower_bound(requests.begin(), requests.end(), |
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distribution.local(i->first.second)); |
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tgt_local = descriptor_responses[dest][pos - requests.begin()]; |
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} |
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add_edge(i->first.first, vertex_descriptor(dest, tgt_local), |
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i->second, *this); |
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} |
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synchronize(process_group_); |
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} |
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template<PBGL_DISTRIB_ADJLIST_TEMPLATE_PARMS> |
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template<typename EdgeIterator, typename VertexListS> |
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void |
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PBGL_DISTRIB_ADJLIST_TYPE:: |
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initialize(EdgeIterator first, EdgeIterator last, |
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vertices_size_type n, const base_distribution_type& distribution, |
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VertexListS) |
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{ |
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using boost::parallel::inplace_all_to_all; |
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typedef vertices_size_type vertex_number_t; |
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typedef std::pair<vertex_descriptor, vertex_number_t> delayed_edge_t; |
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process_group_type pg = process_group(); |
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process_id_type id = process_id(pg); |
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// Vertex indices |
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std::vector<local_vertex_descriptor> index_to_vertex; |
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index_to_vertex.reserve(num_vertices(*this)); |
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BGL_FORALL_VERTICES_T(v, base(), inherited) |
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index_to_vertex.push_back(v); |
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// The list of edges we can't add immediately. |
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std::vector<delayed_edge_t> delayed_edges; |
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std::vector<std::vector<vertex_number_t> > descriptor_requests; |
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descriptor_requests.resize(num_processes(pg)); |
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// Add all of the edges we can, up to the point where we run |
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// into a descriptor we don't know. |
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while (first != last) { |
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if (distribution(first->first) == id) { |
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if (distribution(first->second) != id) break; |
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vertex_descriptor source |
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(id, index_to_vertex[distribution.local(first->first)]); |
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vertex_descriptor target |
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(distribution(first->second), |
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index_to_vertex[distribution.local(first->second)]); |
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add_edge(source, target, *this); |
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} |
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++first; |
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} |
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// Queue all of the remaining edges and determine the set of |
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// descriptors we need to know about. |
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while (first != last) { |
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if (distribution(first->first) == id) { |
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vertex_descriptor source |
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(id, index_to_vertex[distribution.local(first->first)]); |
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process_id_type dest = distribution(first->second); |
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if (dest != id) { |
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descriptor_requests[dest] |
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.push_back(distribution.local(first->second)); |
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// Compact request list if we need to |
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if (descriptor_requests[dest].size() > |
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distribution.block_size(dest, n)) { |
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std::sort(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()); |
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descriptor_requests[dest].erase( |
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std::unique(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()), |
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descriptor_requests[dest].end()); |
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} |
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} |
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// Save the edge for later |
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delayed_edges.push_back(delayed_edge_t(source, first->second)); |
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} |
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++first; |
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} |
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// Compact descriptor requests |
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for (process_id_type dest = 0; dest < num_processes(pg); ++dest) { |
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std::sort(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()); |
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descriptor_requests[dest].erase( |
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std::unique(descriptor_requests[dest].begin(), |
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descriptor_requests[dest].end()), |
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descriptor_requests[dest].end()); |
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} |
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// Send out all of the descriptor requests |
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std::vector<std::vector<vertex_number_t> > in_descriptor_requests; |
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in_descriptor_requests.resize(num_processes(pg)); |
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inplace_all_to_all(pg, descriptor_requests, in_descriptor_requests); |
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// Reply to all of the descriptor requests |
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std::vector<std::vector<local_vertex_descriptor> > |
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descriptor_responses; |
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descriptor_responses.resize(num_processes(pg)); |
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for (process_id_type dest = 0; dest < num_processes(pg); ++dest) { |
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for (std::size_t i = 0; i < in_descriptor_requests[dest].size(); ++i) { |
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local_vertex_descriptor v = |
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index_to_vertex[in_descriptor_requests[dest][i]]; |
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descriptor_responses[dest].push_back(v); |
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} |
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in_descriptor_requests[dest].clear(); |
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} |
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in_descriptor_requests.clear(); |
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inplace_all_to_all(pg, descriptor_responses); |
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// Add the queued edges |
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for(typename std::vector<delayed_edge_t>::iterator i |
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= delayed_edges.begin(); i != delayed_edges.end(); ++i) { |
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process_id_type dest = distribution(i->second); |
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local_vertex_descriptor tgt_local; |
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if (dest == id) { |
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tgt_local = index_to_vertex[distribution.local(i->second)]; |
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} else { |
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std::vector<vertex_number_t>& requests = descriptor_requests[dest]; |
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typename std::vector<vertex_number_t>::iterator pos = |
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std::lower_bound(requests.begin(), requests.end(), |
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distribution.local(i->second)); |
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tgt_local = descriptor_responses[dest][pos - requests.begin()]; |
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} |
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add_edge(i->first, vertex_descriptor(dest, tgt_local), *this); |
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} |
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synchronize(process_group_); |
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} |
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} // end namespace boost |
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#endif // BOOST_GRAPH_DISTRIBUTED_ADJLIST_INITIALIZE_HPP
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